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An Office of Science User Facility

2016 Publications

LCLS provides access to state-of-the-art instruments at no charge for scientists who conduct non-proprietary research, with the understanding that significant results are to be publicly disseminated. Inform the LCLS User Research Administration (URA) office when papers are accepted or about to be published.

Communicating research results with us in advance allows us to work with users, their home institutions and funding agencies to promote the latest LCLS science and to amplify media efforts through press releases and features. Please review the LCLS communications policies.

Progress Report: When submitting a new proposal, also upload a brief progress report summarizing proposal that have previously received LCLS beam time; include proposal number(s), date(s) of experiment, instrument(s) used, a brief summary of how experiment time was used and results disseminated (list major invited talks, papers published or in press, awards or special recognition).

NOTE: User publications are extremely important in demonstrating the scientific impact of LCLS. Proposal teams must inform and acknowledge LCLS and the DOE Office of Science in presentations and publications using this template:

"Use of the Linac Coherent Light Source (LCLS), SLAC National Accelerator Laboratory, is supported by the U.S. Department of Energy, Office of Science, Office of Basic Energy Sciences under Contract No. DE-AC02-76SF00515."

To submit a paper for inclusion on this page, please visit the LCLS Publication Submission webpage.

QuickLinks

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 X-ray Science Performed at LCLS

 
Thomas Kroll, Jan Kern, Markus Kubin, Daniel Ratner, Sheraz Gul, Franklin D. Fuller, Heike Löchel, Jacek Krzywinski, Alberto Lutman, Yuantao Ding, Georgi L. Dakovski, Stefan Moeller, Joshua J. Turner, Roberto Alonso-Mori, Dennis L. Nordlund, Jens Rehanek, Christian Weniger, Alexander Firsov, Maria Brzhezinskaya, Ruchira Chatterjee, Benedikt Lassalle-Kaiser, Raymond G. Sierra, Hartawan Laksmono, Ethan Hill, Andrew Borovik, Alexei Erko, Alexander Föhlisch, Rolf Mitzner, Vittal K. Yachandra, Junko Yano, Philippe Wernet, and Uwe Bergmann "X-ray absorption spectroscopy using a self-seeded soft X-ray free-electron laser" Optics Express 24 22469 (2016) doi: 10.1364/OE.24.022469

Brian Abbey, Ruben A. Dilanian, Connie Darmanin, Rebecca A. Ryan, Corey T. Putkunz, Andrew V. Martin, David Wood, Victor Streltsov, Michael W. M. Jones, Naylyn Gaffney, Felix Hofmann, Garth J. Williams, Sébastien Boutet, Marc Messerschmidt, M. Marvin Seibert, Sophie Williams, Evan Curwood, Eugeniu Balaur, Andrew G. Peele, Keith A. Nugent and Harry M. Quiney "X-ray laser–induced electron dynamics observed by femtosecond diffraction from nanocrystals of Buckminsterfullerene" Science Advances 2 (2016) doi: 10.1126/sciadv.1601186

Martin Beye, Henrik Öberg, Hongliang Xin, Georgi L. Dakovski, Martina Dell’Angela, Alexander Föhlisch, Jörgen Gladh, Markus Hantschmann, Florian Hieke, Sarp Kaya, Danilo Kühn, Jerry LaRue, Giuseppe Mercurio, Michael P. Minitti, Ankush Mitra, Stefan P. Moeller, May Ling Ng, Anders Nilsson, Dennis Nordlund, Jens Nørskov, Henrik Öström, Hirohito Ogasawara, Mats Persson, William F. Schlotter, Jonas A. Sellberg, Martin Wolf, Frank Abild-Pedersen, Lars G. M. Pettersson, and Wilfried Wurth "Chemical Bond Activation Observed with an X-ray Laser" J. Phys. Chem. Lett. 7 3647 (2016) doi: 10.1021/acs.jpclett.6b01543

Przemyslaw Nogly, Valerie Panneels, Garrett Nelson, Cornelius Gati, Tetsunari Kimura, Christopher Milne, Despina Milathianaki, Minoru Kubo, Wenting Wu, Chelsie Conrad, Jesse Coe, Richard Bean, Yun Zhao, Petra Båth, Robert Dods, Rajiv Harimoorthy, Kenneth R. Beyerlein, Jan Rheinberger, Daniel James, Daniel DePonte, Chufeng Li, Leonardo Sala, Garth J. Williams, Mark S. Hunter, Jason E. Koglin, Peter Berntsen, Eriko Nango, So Iwata, Henry N. Chapman, Petra Fromme, Matthias Frank, Rafael Abela, Sébastien Boutet, Anton Barty, Thomas A. White, Uwe Weierstall, John Spence, Richard Neutze, Gebhard Schertler & Jörg Standfuss "Lipidic cubic phase injector is a viable crystal delivery system for time-resolved serial crystallography" Nature Communications 7 12314 (2016) doi: 10.1038/ncomms12314

E.J. Gamboa, B. Bachmann, D. Kraus, M.J. MacDonald, M. Bucher, S. Carron, R.N. Coffee, R.P. Drake, J. Emig, K.R. Ferguson, S.H. Glenzer, T. Gorkhover, S.P. Hau-Riege, J. Krzywinski, A.L. Levitan, K.-H. Meiwes-Broer, T. Osipov, T. Pardini, C. Peltz, S. Skruszewicz, C. Bostedt, T. Fennel and T. Döppner "Dual crystal x-ray spectrometer at 1.8 keV for high repetition-rate single-photon counting spectroscopy experiments" ​​Journal of Instrumentation 11 (2016) doi: 10.1088/1748-0221/11/08/P08015

L. B. Fletcher, U. Zastrau, E. Galtier, E. J. Gamboa, S. Goede, W. Schumaker, A. Ravasio, M. Gauthier, M. J. MacDonald, Z. Chen, E. Granados, H. J. Lee, A. Fry, J. B. Kim, C. Roedel, R. Mishra, A. Pelka, D. Kraus, B. Barbrel, T. Döppner, and S. H. Glenzer "High resolution x-ray Thomson scattering measurements from cryogenic hydrogen jets using the linac coherent light source" Rev. Sci. Instrum. 87 11E524 (2016) doi: 10.1063/1.4959792

Anna Munke, Jakob Andreasson, Andrew Aquila, Salah Awel, Kartik Ayyer, Anton Barty, Richard J. Bean, Peter Berntsen, Johan Bielecki, Sébastien Boutet, Maximilian Bucher, Henry N. Chapman, Benedikt J. Daurer, Hasan DeMirci, Veit Elser, Petra Fromme, Janos Hajdu, Max F. Hantke, Akifumi Higashiura, Brenda G. Hogue, Ahmad Hosseinizadeh, Yoonhee Kim, Richard A. Kirian, Hemanth K.N. Reddy, Ti-Yen Lan, Daniel S.D. Larsson, Haiguang Liu, N. Duane Loh, Filipe R.N.C. Maia, Adrian P. Mancuso, Kerstin Mühlig, Atsushi Nakagawa, Daewoong Nam, Garrett Nelson, Carl Nettelblad, Kenta Okamoto, Abbas Ourmazd, Max Rose, Gijs van der Schot, Peter Schwander, M. Marvin Seibert, Jonas A. Sellberg, Raymond G. Sierra, Changyong Song, Martin Svenda, Nicusor Timneanu, Ivan A. Vartanyants, Daniel Westphal, Max O. Wiedorn, Garth J. Williams, Paulraj Lourdu Xavier, Chun Hong Yoon & James Zook "Coherent diffraction of single Rice Dwarf virus particles using hard X-rays at the Linac Coherent Light Source" Scientific Data 3 (2016) doi: 10.1038/sdata.2016.64

Filipe R. N. C. Maia, Thomas A. White, N. Duane Loh, and Janos Hajdu "CCP-FEL: a collection of computer programs for free-electron laser research" J. Appl. Cryst. 49 1117 (2016) doi: 10.1107/S1600576716011134

Thomas A. White, Anton Barty, Wei Liu, Andrii Ishchenko, Haitao Zhang, Cornelius Gati, Nadia A. Zatsepin, Shibom Basu, Dominik Oberthür, Markus Metz, Kenneth R. Beyerlein, Chun Hong Yoon, Oleksandr M. Yefanov, Daniel James, Dingjie Wang, Marc Messerschmidt, Jason E. Koglin, Sébastien Boutet, Uwe Weierstall & Vadim Cherezov "Serial femtosecond crystallography datasets from G protein-coupled receptors" Scientific Data 3 (2016) doi: 10.1038/sdata.2016.57

Saeed Oghbaey, Antoine Sarracini, Helen M. Ginn, Olivier Pare-Labrosse, Anling Kuo, Alexander Marx, Sascha W. Epp, Darren A. Sherrell, Bryan T. Eger, Yinpeng Zhong, Rolf Loch, Valerio Mariani, Roberto Alonso-Mori, Silke Nelson, Henrik T. Lemke, Robin L. Owen, Arwen R. Pearson, David I. Stuart, Oliver P. Ernst, Henrike M. Mueller-Werkmeistera, and R. J. Dwayne Millera "Fixed target combined with spectral mapping: approaching 100% hit rates for serial crystallography" Acta Crystallographica Section D: Structural Biology 72 944 (2016) doi: 10.1107/S2059798316010834

Tomas Ekeberg, Martin Svenda, M. Marvin Seibert, Chantal Abergel, Filipe R.N.C. Maia, Virginie Seltzer, Daniel P. DePonte, Andrew Aquila, Jakob Andreasson, Bianca Iwan, Olof Jönsson, Daniel Westphal, Duško Odić, Inger Andersson, Anton Barty, Meng Liang, Andrew V. Martin, Lars Gumprecht, Holger Fleckenstein, Saša Bajt, Miriam Barthelmess, Nicola Coppola, Jean-Michel Claverie, N. Duane Loh, Christoph Bostedt, John D. Bozek, Jacek Krzywinski, Marc Messerschmidt, Michael J. Bogan, Christina Y. Hampton, Raymond G. Sierra, Matthias Frank, Robert L. Shoeman, Lukas Lomb, Lutz Foucar, Sascha W. Epp, Daniel Rolles, Artem Rudenko, Robert Hartmann, Andreas Hartmann, Nils Kimmel, Peter Holl, Georg Weidenspointner, Benedikt Rudek, Benjamin Erk, Stephan Kassemeyer, Ilme Schlichting, Lothar Strüder, Joachim Ullrich, Carlo Schmidt, Faton Krasniqi, Günter Hauser, Christian Reich, Heike Soltau, Sebastian Schorb, Helmut Hirsemann, Cornelia Wunderer, Heinz Graafsma, Henry Chapman & Janos Hajdu "Single-shot diffraction data from the Mimivirus particle using an X-ray free-electron laser" Scientific Data 3 (2016) doi: 10.1038/sdata.2016.60

Max F. Hantke, Dirk Hasse, Tomas Ekeberg, Katja John, Martin Svenda, Duane Loh, Andrew V. Martin, Nicusor Timneanu1, Daniel S.D. Larsson, Gijs van der Schot, Gunilla H. Carlsson, Margareta Ingelman, Jakob Andreasson, Daniel Westphal, Bianca Iwan, Charlotte Uetrecht, Johan Bielecki, Mengning Liang, Francesco Stellato, Daniel P. DePonte, Sadia Bari, Robert Hartmann, Nils Kimmel, Richard A. Kirian, M. Marvin Seibert, Kerstin Mühlig, Sebastian Schorb, Ken Ferguson, Christoph Bostedt, Sebastian Carron, John D. Bozek, Daniel Rolles, Artem Rudenko, Lutz Foucar, Sascha W. Epp, Henry N. Chapman, Anton Barty, Inger Andersson, Janos Hajdu, & Filipe R.N.C. Maia "A data set from flash X-ray imaging of carboxysomes" Scientific Data 3 (2016) doi: 10.1038/sdata.2016.61

Gijs van der Schot , Martin Svenda , Filipe R.N.C. Maia , Max F. Hantke , Daniel P. DePonte , M. Marvin Seibert , Andrew Aquila , Joachim Schulz , Richard A. Kirian , Mengning Liang , Francesco Stellato , Sadia Bari , Bianca Iwan , Jakob Andreasson , Nicusor Timneanu , Johan Bielecki , Daniel Westphal , Francisca Nunes de Almeida , Duško Odić , Dirk Hasse , Gunilla H. Carlsson , Daniel S.D. Larsson , Anton Barty , Andrew V. Martin , Sebastian Schorb , Christoph Bostedt , John D. Bozek , Sebastian Carron , Ken Ferguson , Daniel Rolles , Artem Rudenko , Sascha W. Epp , Lutz Foucar , Benedikt Rudek , Benjamin Erk , Robert Hartmann , Nils Kimmel , Peter Holl , Lars Englert , N. Duane Loh , Henry N. Chapman , Inger Andersson , Janos Hajdu & Tomas Ekeberg "Open data set of live cyanobacterial cells imaged using an X-ray laser" Scientific Data 3 (2016) doi: 10.1038/sdata.2016.58

Helen Mary Ginn, Philip Roedig, Anling Kuo, Gwyndaf Evans, Nicholas K. Sauter, Oliver Ernst, Alke Meents, Henrike Mueller-Werkmeister, R. J. Dwayne Millerg, and David Ian Stuart "TakeTwo: an indexing algorithm suited to still images with known crystal parameters" Acta Cryst. D72 956 (2016) doi: 10.1107/S2059798316010706

J. Thayer, D. Damiani, C. Ford, I. Gaponenko, W. Kroeger, C. O'Grady, J. Pines, T. Tookey, M. Weaver and A. Perazzo "Data systems for the Linac Coherent Light Source" J. Appl. Cryst. 49 1363 (2016) doi: 10.1107/S1600576716011055

Marcin Sikorski, Yiping Feng, Sanghoon Song, Diling Zhu, Gabriella Carini, Sven Herrmann, Kurtis Nishimura, Philip Hart and Aymeric Robert "Application of an ePix100 detector for coherent scattering using a hard X-ray free-electron laser" J. Synchrotron Rad. 23 (2016) doi: 10.1107/S1600577516010869

A. Singer, S. K. K. Patel, R. Kukreja, V. Uhlíř, J. Wingert, S. Festersen, D. Zhu, J. M. Glownia, H. T. Lemke, S. Nelson, M. Kozina, K. Rossnagel, M. Bauer, B. M. Murphy, O. M. Magnussen, E. E. Fullerton, and O. G. Shpyrko "Photoinduced Enhancement of the Charge Density Wave Amplitude" Phys. Rev. Lett. 117 056401 (2016) doi: 10.1103/PhysRevLett.117.056401

M. P. Jiang, M. Trigo, I. Savić, S. Fahy, É. D. Murray, C. Bray, J. Clark, T. Henighan, M. Kozina, M. Chollet, J. M. Glownia, M. C. Hoffmann, D. Zhu, O. Delaire, A. F. May, B. C. Sales, A. M. Lindenberg, P. Zalden, T. Sato, R. Merlin & D. A. Reis "The origin of incipient ferroelectricity in lead telluride" Nature Communications 7 (2016) doi: 10.1038/ncomms12291

Haiguang Liu, John C. H. Spence "XFEL data analysis for structural biology" Quantitative Biology 4 (2016) doi: 10.1007/s40484-016-0076-z

U. Zastrau, E. J. Gamboa, D. Kraus, J. F. Benage, R. P. Drake, P. Efthimion, K. Falk, R. W. Falcone, L. B. Fletcher, E. Galtier, M. Gauthier, E. Granados, J. B. Hastings, P. Heimann, K. Hill, P. A. Keiter, J. Lu, M. J. MacDonald, D. S. Montgomery, B. Nagler, N. Pablant, A. Schropp, B. Tobias, D. O. Gericke, S. H. Glenzer, and H. J. Lee "Tracking the density evolution in counter-propagating shock waves using imaging X-ray scattering" Appl. Phys. Lett. 109 031108 (2016) doi: 10.1063/1.4959256

T. Henighan, M. Trigo, M. Chollet, J. N. Clark, S. Fahy, J. M. Glownia, M. P. Jiang, M. Kozina, H. Liu, S. Song, D. Zhu, and D. A. Reis "Control of two-phonon correlations and the mechanism of high-wavevector phonon generation by ultrafast light pulses" Phys. Rev. B 94 020302 (2016) doi: 10.1103/PhysRevB.94.020302

B. Wu, T. Wang, C. E. Graves, D. Zhu, W. F. Schlotter, J. J. Turner, O. Hellwig, Z. Chen, H. A. Dürr, A. Scherz, and J. Stöhr "Elimination of X-Ray Diffraction through Stimulated X-Ray Transmission" Phys. Rev. Lett. 117 027401 (2016) doi: 10.1103/PhysRevLett.117.027401

Paola Gallo, Katrin Amann-Winkel, Charles Austen Angell, Mikhail Alexeevich Anisimov, Frédéric Caupin, Charusita Chakravarty, Erik Lascaris, Thomas Loerting, Athanassios Zois Panagiotopoulos, John Russo, Jonas Alexander Sellberg, Harry Eugene Stanley, Hajime Tanaka, Carlos Vega, Limei Xu, and Lars Gunnar Moody Pettersson "Water: A Tale of Two Liquids" Chem. Rev. --- (2016) doi: 10.1021/acs.chemrev.5b00750

Elisa Biasin, Tim Brandt van Driel, Kasper S. Kjær, Asmus O. Dohn, Morten Christensen, Tobias Harlang, Pavel Chabera, Yizhu Liu, Jens Uhlig, Mátyás Pápai, Zoltán Németh, Robert Hartsock, Winnie Liang, Jianxin Zhang, Roberto Alonso-Mori, Matthieu Chollet, James M. Glownia, Silke Nelson, Dimosthenis Sokaras, Tadesse A. Assefa, Alexander Britz, Andreas Galler, Wojciech Gawelda, Christian Bressler, Kelly J. Gaffney, Henrik T. Lemke, Klaus B. Møller, Martin M. Nielsen, Villy Sundström,2 György Vankó, Kenneth Wärnmark, Sophie E. Canton, and Kristoffer Haldrup "Femtosecond X-Ray Scattering Study of Ultrafast Photoinduced Structural Dynamics in Solvated [Co(terpy)2]2+" Phys. Rev. Lett. 117 013002 (2016) doi: 10.1103/PhysRevLett.117.013002

Lutz Foucar "CFEL–ASG Software Suite (CASS): usage for free-electron laser experiments with biological focus" Journal of Applied Crystallography 49 (2016) doi: 10.1107/S1600576716009201

L. Rettig, C. Dornes, N. Thielemann-Kühn, N. Pontius, H. Zabel, D. L. Schlagel, T. A. Lograsso, M. Chollet, A. Robert, M. Sikorski, S. Song, J. M. Glownia, C. Schüßler-Langeheine, S. L. Johnson, and U. Staub "Itinerant and Localized Magnetization Dynamics in Antiferromagnetic Ho" Phys. Rev. Lett. 116 257202 (2016) doi: 10.1103/PhysRevLett.116.257202

Kartik Ayyer, Ti-Yen Lan, Veit Elser and N. Duane Loh "Dragonfly: an implementation of the expand–maximize–compress algorithm for single-particle imaging" J. Appl. Cryst. 49 (2016) doi: 10.1107/S1600576716008165

I. Steinke, M. Walther, F. Lehmkühler, P. Wochner, J. Valerio, R. Mager, M. A. Schroer, S. Lee, W. Roseker, A. Jain, M. Sikorski, S. Song, R. Hartmann, M. Huth, L. Strüder, M. Sprung, A. Robert, P. H. Fuoss, G. B. Stephenson, and G. Grübel "A liquid jet setup for x-ray scattering experiments on complex liquids at free-electron laser sources" Rev. Sci. Instrum. 87 063905 (2016) doi: 10.1063/1.4953921

O Krupin, G L Dakovski, B J Kim, J W Kim, Jungho Kim, S Mishra, Yi-De Chuang, C R Serrao, W-S Lee, W F Schlotter, M P Minitti, D Zhu, D Fritz, M Chollet, R Ramesh, S L Molodtsov and J J Turner "Ultrafast dynamics of localized magnetic moments in the unconventional Mott insulator Sr2IrO4" J. Phys.: Condens. Matter 28 32LT01 (2016) doi: 10.1088/0953-8984/28/32/32LT01

M. W. C. Dharma-wardana "Dynamic conductivity and plasmon profile of aluminum in the ultra-fast-matter regime" Phys. Rev. E 93 063205 (2016) doi: 10.1103/PhysRevE.93.063205

Victor Kimberg, Alvaro Sanchez-Gonzalez, Laurent Mercadier, Clemens Weninger, Alberto Lutman, Daniel Ratner, Ryan N Coffee, Maximilian Bucher, Melanie Mucke, Marcus Agåker, Conny Såthe, Christoph Bostedt, Joseph Nordgren, Jan-Erik Rubensson and Nina Rohringer "Stimulated x-ray Raman Scattering – a critical assessment of the building block of nonlinear x-ray spectroscopy" Faraday Discuss.  (2016) doi: 10.1039/C6FD00103C

T. Henighan, M. Trigo, S. Bonetti, P. Granitzka, D. Higley, Z. Chen, M. P. Jiang, R. Kukreja, A. Gray, A. H. Reid, E. Jal, M. C. Hoffmann, M. Kozina, S. Song, M. Chollet, D. Zhu, P. F. Xu, J. Jeong, K. Carva, P. Maldonado, P. M. Oppeneer, M. G. Samant, S. S. P. Parkin, D. A. Reis, and H. A. Dürr "Generation mechanism of terahertz coherent acoustic phonons in Fe" Phys. Rev. B 93 220301 (2016) doi: 10.1103/PhysRevB.93.220301

Megan L. Shelby, Patrick J. Lestrange, Nicholas E. Jackson, Kristoffer Haldrup, Michael W. Mara, Andrew B. Stickrath, Diling Zhu, Henrik T. Lemke, Matthieu Chollet, Brian M. Hoffman, Xiaosong Li, and Lin X. Chen "Ultrafast Excited State Relaxation of a Metalloporphyrin Revealed by Femtosecond X-ray Absorption Spectroscopy" J. Am. Chem. Soc. 138 8752 (2016) doi: 10.1021/jacs.6b02176

Brian Stankus, James M. Budarz, Adam Kirrander, David M Rogers, Joseph Robinson, T J Lane, Daniel Ratner, Jerome Hastings, Michael P Minitti and Peter M. Weber "Femtosecond Photodissociation Dynamics of 1,4-Diiodobenzene by Gas-Phase X-Ray Scattering and Photoelectron Spectroscopy" Faraday Discuss --- (2016) doi: 10.1039/C6FD00135A

Roberto Alonso Mori, K. Asa, Uwe Bergmann, Aaron S. Brewster, Ruchira Chatterjee, Jason Kyle Cooper, Heinz Markus Frei, Franklin D. Fuller, Eric Goggins, Sheraz Gul, Hironobu Fukuzawa, Denys Iablonskyi, Mohamed Ibrahim, Tetsuo Katayama, Thomas Kroll, Yoshiaki Kumagai, Beth Anne McClure, Johannes Messinger, Prof., Koji Motomura, Kiyonobu Nagaya, Toshiyuki Nishiyama, Claudio Saracini, Yuhiro Sato, Nicholas K. Sauter, Dimosthenis Sokaras, Tsukasa Takanashi, Tadashi Togashi, Kiyoshi Ueda, Walter Warren Weare, Tsu-chien Weng, Makina Yabashi, Vittal K Yachandra, Iris D. Young, Athina Zouni, Jan Kern and Junko Yano "Towards Characterization of Photo-Excited Electron Transfer and Catalysis in Natural and Artificial Systems Using XFELs" Faraday Discuss --- (2016) doi: 10.1039/C6FD00084C

Helen Mary Ginn, Gwyndaf Evans, Nicholas K. Sauter and David Ian Stuart "On the release of cppxfel for processing X-ray free-electron laser images" J. Appl. Cryst. 49 (2016) doi: 10.1107/S1600576716006981

Artem Y. Lyubimov, Monarin Uervirojnangkoorn, Oliver B. Zeldin, Aaron S. Brewster, Thomas D. Murray, Nicholas K. Sauter, James M. Berger, William I. Weis and Axel T. Brunger "IOTA: integration optimization, triage and analysis tool for the processing of XFEL diffraction images" J. Appl. Cryst. 49 (2016) doi: 10.1107/S1600576716006683

V. Mariani, A. Morgan, C. H. Yoon, T. J. Lane, T. A. White, C. O'Grady, M. Kuhn, S. Aplin, J. Koglin, A. Barty and H. N. Chapman "OnDA: online data analysis and feedback for serial X-ray imaging" J. Appl. Cryst. 49 1073 (2016) doi: 10.1107/S1600576716007469

G. Blaj, G.Carini, S. Carron, G. Haller, P. Hart, J. Hasi, S. Herrmann, C. Kenney, J.Segal, C.A.Stan, A.Tomada "Detector Damage at X-Ray Free-Electron Laser Sources" IEEE Transactions on Nuclear Science 63 1818 (2016) doi: 10.1109/TNS.2016.2567448

Claudiu A. Stan, Despina Milathianaki, Hartawan Laksmono, Raymond G. Sierra, Trevor A. McQueen, Marc Messerschmidt, Garth J. Williams, Jason E. Koglin, Thomas J. Lane, Matt J. Hayes, Serge A. H. Guillet, Mengning Liang, Andrew L. Aquila, Philip R. Willmott, Joseph S. Robinson, Karl L. Gumerlock, Sabine Botha, Karol Nass, Ilme Schlichting, Robert L. Shoeman, Howard A. Stone & Sébastien Boutet "Liquid explosions induced by X-ray laser pulses" Nature Physics --- (2016) doi: 10.1038/nphys3779

Ciricosta, O., Vinko, S. M., Barbrel, B., Rackstraw, D. S., Preston, T. R., Burian, T., Chalupsky, J., Cho, B. I., Chung, H. -K., Dakovski, G. L., Engelhorn, K., Hajkova, V., Heimann, P., Holmes, M., Juha, L. , Krzywinski, J., Lee, R. W., Toleikis, S., Turner, J. J., Zastrau, U. , Wark, J. S. "Measurements of continuum lowering in solid-density plasmas created from elements and compounds" Nature Communications 7 152021 (2016) doi: 10.1038/ncomms11713

A. Picón, C. S. Lehmann, C. Bostedt, A. Rudenko, A. Marinelli, T. Osipov, D. Rolles, N. Berrah, C. Bomme, M. Bucher, G. Doumy, B. Erk, K. R. Ferguson, T. Gorkhover, P. J. Ho, E. P. Kanter, B. Krässig, J. Krzywinski, A. A. Lutman, A. M. March, D. Moonshiram, D. Ray, L. Young, S. T. Pratt & S. H. Southworth "Hetero-site-specific X-ray pump-probe spectroscopy for femtosecond intramolecular dynamics" Nature Communications 7 (2016) doi: 10.1038/ncomms11652

Nora Berrah, Li Fang, Brendan F Murphy, Edwin Kukk, Timur Y. Osipov, Ryan Coffee, Ken R Ferguson, Hui Xiong, Jean-Charles Castagna, Vlad S Petrovic, Sebastian Carron Montero, and John D. Bozek "Two mirror X-ray pulse split and delay instrument for femtosecond time resolved investigations at the LCLS free electron laser facility" Optics Express 24 11768 (2016) doi: 10.1364/OE.24.011768

Nicholas K. Sauter, Nathaniel Echols, Paul D. Adams, Petrus H. Zwart, Jan Kern, Aaron S. Brewster, Sergey Koroidov,Roberto Alonso-Mori, Athina Zouni, Johannes Messinger, Uwe Bergmann, Junko Yano & Vittal K. Yachandra "No observable conformational changes in PSII" Nature 533 152021 (2016) doi: 10.1038/nature17983

Garrett Nelson, Richard A. Kirian, Uwe Weierstall, Nadia A. Zatsepin, Tomáš Faragó, Tilo Baumbach, Fabian Wilde, Fabian B. P. Niesler, Benjamin Zimmer, Izumi Ishigami, Masahide Hikita, Saša Bajt, Syun-Ru Yeh, Denis L. Rousseau, Henry N. Chapman, John C. H. Spence, and Michael Heymann "Three-dimensional-printed gas dynamic virtual nozzles for x-ray laser sample delivery" Optics Express 24 152021 (2016) doi: 10.1364/OE.24.011515

Claudiu A. Stan, Philip R. Willmott, Howard A. Stone, Jason E. Koglin, Mengning Liang, Andrew L. Aquila, Joseph S. Robinson, Karl L. Gumerlock, Gabriel Blaj, Raymond G. Sierra, Sébastien Boutet, Serge A. H. Guillet, Robin H. Curtis, Sharon L. Vetter, Henrik Loos, James L. Turner, and Franz-Josef Decker "Negative Pressures and Spallation in Water Drops Subjected to Nanosecond Shock Waves" J. Phys. Chem. Lett. 7 2055 (2016) doi: 10.1021/acs.jpclett.6b00687

Glenzer, S H; Fletcher, L B; Galtier, E; Nagler, B; Alonso-Mori, R; Barbrel, B; Brown, S B; Chapman, D A; Chen, Z; Curry, C B; Fiuza, F; Gamboa, E; Gauthier, M; Gericke, D O; Gleason, A; Goede, S; Granados, E; Heimann, P; Kim, J; Kraus, D; MacDonald, M J; Mackinnon, A J; Mishra, R; Ravasio, A; Roedel, C; Sperling, P; Schumaker, W; Tsui, Y Y; Vorberger, J; Zastrau, U; Fry, A; White, W E; Hasting, J B; Lee, H J "Matter under extreme conditions experiments at the Linac Coherent Light Source " Journal of Physics B: Atomic, Molecular and Optical Physics 49 92001 (2016) doi: 10.1088/0953-4075/49/9/092001

M. P. M. Dean,Y. Cao, X. Liu, S. Wall, D. Zhu, R. Mankowsky, V. Thampy, X. M. Chen, J. G. Vale, D. Casa, Jungho Kim, A. H. Said, P. Juhas, R. Alonso-Mori, J.M. Glownia, A. Robert, J. Robinson, M. Sikorski, S. Song, M. Kozina, H. Lemke, L. Patthey, S. Owada, T. Katayama, M. Yabashi, Yoshikazu Tanaka, T. Togashi, J. Liu, C. Rayan Serrao, B. J. Kim, L. Huber, C.-L. Chang, D. F. McMorrow, M. Först & J. P. Hill "Ultrafast energy- and momentum-resolved dynamics of magnetic correlations in the photo-doped Mott insulator Sr2IrO4" Nature Materials -- (2016) doi: 10.1038/NMAT4641

Kanupriya Pande, Christopher D. M. Hutchison, Gerrit Groenhof, Andy Aquila, Josef S. Robinson, Jason Tenboer, Shibom Basu, Sébastien Boutet, Daniel P. DePonte, Mengning Liang, Thomas A. White, Nadia A. Zatsepin, Oleksandr Yefanov, Dmitry Morozov, Dominik Oberthuer, Cornelius Gati, Ganesh Subramanian, Daniel James, Yun Zhao, Jake Koralek, Jennifer Brayshaw, Christopher Kupitz, Chelsie Conrad, Shatabdi Roy-Chowdhury, Jesse D. Coe, Markus Metz, Paulraj Lourdu Xavier, Thomas D. Grant, Jason E. Koglin, Gihan Ketawala, Raimund Fromme, Vukica Šrajer, Robert Henning, John C. H. Spence, Abbas Ourmazd, Peter Schwander, Uwe Weierstall, Matthias Frank, Petra Fromme, Anton Barty, Henry N. Chapman, Keith Moffat, Jasper J. van Thor, Marius Schmidt "Femtosecond structural dynamics drives the trans/cis isomerization in photoactive yellow protein" Science 352 725(2016) doi: 10.1126/science.aad5081

Manuel Sanchez del Rio,a Davide Bianchi, Daniele Cocco, Mark Glass, Mourad Idir,dJim Metz, Lorenzo Raimondi, Luca Rebuffi, Ruben Reininger, Xianbo Shi, Frank Siewert, Sibylle Spielmann-Jaegg, Peter Takacs, Muriel Tomasset, Tom Tonnessen, Amparo Vivo and Valeriy Yashchuk "DABAM: an open-source database of X-ray mirrors metrology" J. Synchrotron Rad. 23 665 (2016) doi: 10.1107/S1600577516005014

T. D. Swinburne, M. G. Glavicic, K. M. Rahman, N. G. Jones, J. Coakley, D. E. Eakins, T. G. White, V. Tong, D. Milathianaki, G. J. Williams, D. Rugg, A. P. Sutton, and D. Dye "Picosecond dynamics of a shock-driven displacive phase transformation in Zr" Phys. Rev. B 93 144119 (2016) doi: 10.1103/PhysRevB.93.144119

Benedikt J. Daurer, Max F. Hantke, Carl Nettelblad, and Filipe R. N. C. Maia "Hummingbird: monitoring and analyzing flash X-ray imaging experiments in real time" J. Appl. Cryst. 49 (2016) doi: 10.1107/S1600576716005926

A. Nilsson, S. Schreck, F. Perakis & L. G. M. Pettersson "Probing water with X-ray lasers" Advances in Physics: X -- (2016) doi: 10.1080/23746149.2016.1165630

X. Edward Zhou, Xiang Gao, Anton Barty, Yanyong Kang, Yuanzheng He, Wei Liu, Andrii Ishchenko, Thomas A. White, Oleksandr Yefanov, Gye Won Han, Qingping Xu, Parker W. de Waal, Kelly M. Suino-Powell, Sébastien Boutet, Garth J. Williams, Meitian Wang, Dianfan Li, Martin Caffrey, Henry N. Chapman, John C.H. Spence, Petra Fromme, Uwe Weierstall, Raymond C. Stevens, Vadim Cherezov, Karsten Melcher & H. Eric Xu "X-ray laser diffraction for structure determination of the rhodopsin-arrestin complex" Scientific Data 3 (2016) doi: 10.1038/sdata.2016.21

D. Damiani, M. Dubrovin, I. Gaponenko, W. Kroeger, T. J. Lane, A. Mitra, C. P. O'Grady, A. Salnikov, A. Sanchez-Gonzalez, D. Schneider and C. H. Yoon "Linac Coherent Light Source data analysis using psana" Journal of Applied Crystallography 49 672 (2016) doi: 10.1107/S1600576716004349

Rebecca Boll, Benjamin Erk, Ryan Coffee, Sebastian Trippel, Thomas Kierspel, Cédric Bomme, John D. Bozek, Mitchell Burkett, Sebastian Carron, Ken R. Ferguson, Lutz Foucar, Jochen Küpper, Tatiana Marchenko, Catalin Miron, Minna Patanen, Timur Osipov, Sebastian Schorb, Marc Simon, Michelle Swiggers, Simone Techert, Kiyoshi Ueda, Christoph Bostedt, Daniel Rolles, and Artem Rudenko "Charge transfer in dissociating iodomethane and fluoromethane molecules ionized by intense femtosecond X-ray pulses" Struct. Dyn. 3 043207 (2016) doi: 10.1063/1.4944344

Daniel J. Higley, Konstantin Hirsch, Georgi L. Dakovski, Emmanuelle Jal, Edwin Yuan, Tianmin Liu, Alberto A. Lutman, James P. MacArthur, Elke Arenholz, Zhao Chen, Giacomo Coslovich, Peter Denes, Patrick W. Granitzka, Philip Hart, Matthias C. Hoffmann , John Joseph, Loïc Le Guyader, Ankush Mitra, Stefan Moeller, Hendrik Ohldag, Matthew Seaberg, Padraic Shafer, Joachim Stöhr, Arata Tsukamoto, Heinz-Dieter Nuhn, Alex H. Reid, Hermann A. Dürr, and William F. Schlotter "Femtosecond X-ray magnetic circular dichroism absorption spectroscopy at an X-ray free electron laser" Rev. Sci. Instrum. 87 033110 (2016) doi: 10.1063/1.4944410

Shufen Ma and Haiguang Liu "Facilitating model reconstruction for single-particle scattering using small-angle X-ray scattering methods" J. Appl. Cryst. 49 665 (2016) doi: 10.1107/S1600576716004337

Christian G. Roessler, Rakhi Agarwal, Marc Allaire, Roberto Alonso-Mori, Babak Andi, José F.R. Bachega, Martin Bommer, Aaron S. Brewster, Michael C. Browne, Ruchira Chatterjee, Eunsun Cho, Aina E. Cohen, Matthew Cowan, Sammy Datwani, Victor L. Davidson, Jim Defever, Brent Eaton, Richard Ellson, Yiping Feng, Lucien P. Ghislain, James M. Glownia, Guangye Han, Johan Hattne, Julia Hellmich, Annie Héroux, Mohamed Ibrahim, Jan Kern, Anthony Kuczewski, Henrik T. Lemke, Pinghua Liu, Lars Majlof, William M. McClintock, Stuart Myers, Silke Nelsen, Joe Olechno, Allen M. Orville, Nicholas K. Sauter, Alexei S. Soares, S. Michael Soltis, Heng Song, Richard G. Stearns, Rosalie Tran, Yingssu Tsai, Monarin Uervirojnangkoorn, Carrie M. Wilmot, Vittal Yachandra, Junko Yano, Erik T. Yukl, Diling Zhu, Athina Zouni "Acoustic Injectors for Drop-On-Demand Serial Femtosecond Crystallography" Structure 24 (2016) doi: 10.1016/j.str.2016.02.007

Ji-Cai Liu, Nora Berrah, Lorenz S Cederbaum, James P Cryan, James M Glownia, Kenneth J Schafer and Christian Buth "Rate equations for nitrogen molecules in ultrashort and intense x-ray pulses" Journal of Physics B: Atomic, Molecular and Optical Physics 49 075602 (2016) doi:10.1088/0953-4075/49/7/075602

D. Kraus, A. Ravasio, M. Gauthier, D. O. Gericke, J. Vorberger, S. Frydrych, J. Helfrich, L. B. Fletcher, G. Schaumann, B. Nagler, B. Barbrel, B. Bachmann, E. J. Gamboa, S. Göde, E. Granados, G. Gregori, H. J. Lee, P. Neumayer, W. Schumaker, T. Döppner, R. W. Falcone, S. H. Glenzer & M. Roth "Nanosecond formation of diamond and lonsdaleite by shock compression of graphite" Nature Communications 7 (2016) doi: 10.1038/ncomms10970

Nora Berrah "Molecular dynamics induced by short and intense x-rays pulses from the LCLS" Phys. Scr. T169 014001 (2016) doi: 10.1088/0031-8949/2016/T169/014001

Ian Robinson, Jesse Clark and Ross Harder "Materials science in the time domain using Bragg coherent diffraction imaging" J. Opt. 18 054007 (2016) doi: 10.1088/2040-8978/18/5/054007

Christoph Bostedt, Sébastien Boutet, David M. Fritz, Zhirong Huang, Hae Ja Lee, Henrik T. Lemke, Aymeric Robert, William F. Schlotter, Joshua J. Turner, and Garth J. Williams "Linac Coherent Light Source: The first five years" Rev. Mod. Phys. 88 015007 (2016) doi: 10.1103/RevModPhys.88.015007

Karol Nass, Anton Meinhart, Thomas R. M. Barends, Lutz Foucar, Alexander Gorel, Andrew Aquila, Sabine Botha, R. Bruce Doak,a Jason Koglin,c Mengning Liang,c Robert L. Shoeman, Garth Williams, Sebastien Boutet and Ilme Schlichting "Protein structure determination by single-wavelength anomalous diffraction phasing of X-ray free-electron laser data" IUCrJ 3 (2016) doi: 10.1107/S2052252516002980

Christopher O. Barnes, Elena G. Kovaleva, Xiaofeng Fu, Hilary P. Stevenson, Aaron S. Brewster, Daniel P. DePonte, Elizabeth L. Baxter, Aina E. Cohen, Guillermo Calero "Assessment of Microcrystal Quality by Transmission Electron Microscopy for Efficient Serial Femtosecond Crystallography" Archives of Biochemistry and Biophysics -- (2016) doi: 10.1016/j.abb.2016.02.011

Arjen J. Jakobi, Daniel M. Passon, Kèvin Knoops, Francesco Stellato, Mengning Liang, Thomas A. White, Thomas Seine, Marc Messerschmidt, Henry Chapman and Matthias Wilmanns "In cellulo serial crystallography of alcohol oxidase crystals inside yeast cells" IUCrJ 3 (2016) doi: 10.1107/S2052252515022927

O. Ciricosta, S. M. Vinko, H.-K. Chung, C. Jackson, R. W. Lee, T. R. Preston, D. S. Rackstraw, and J. S. Wark "Detailed model for hot-dense aluminum plasmas generated by an x-ray free electron laser" Physics of Plasmas 23 022707 (2016) doi: 10.1063/1.4942540

Philip Heimann, Michael MacDonald, Bob Nagler, Hae Ja Lee, Eric Galtier, Brice Arnold, and Zhou Xing "Compound refractive lenses as prefocusing optics for X-ray FEL radiation" J. Synchrotron Radiat. 23 425 (2016) doi: 10.1107/S1600577516001636

Kartik Ayyer, Oleksandr M. Yefanov, Dominik Oberthür, Shatabdi Roy-Chowdhury, Lorenzo Galli, Valerio Mariani, Shibom Basu, Jesse Coe, Chelsie E. Conrad, Raimund Fromme, Alexander Schaffer, Katerina Dörner, Daniel James, Christopher Kupitz, Markus Metz, Garrett Nelson, Paulraj Lourdu Xavier, Kenneth R. Beyerlein, Marius Schmidt, Iosifina Sarrou, John C. H. Spence, Uwe Weierstall, Thomas A. White, Jay-How Yang, Yun Zhao, Mengning Liang, Andrew Aquila, Mark S. Hunter, Joseph S. Robinson, Jason E. Koglin, Sébastien Boutet, Petra Fromme, Anton Barty; Henry N. Chapman "Macromolecular diffractive imaging using imperfect crystals" Nature 530 202 (2016) doi: 10.1038/nature16949

K. Kunnus, I. Josefsson, I. Rajkovic, S. Schreck, W. Quevedo, M. Beye, C. Weniger, S. Grubel, M. Scholz, D. Nordlund, W. Zhang, R. W. Hartsock, K. J. Gaffney, W. F. Schlotter, J. J. Turner, B. Kennedy, F. Hennies, F. M. F. de Groot, S. Techert, M. Odelius, Ph. Wernet, and A. Fohlisch "Identification of the dominant photochemical pathways and mechanistic insights to the ultrafast ligand exchange of Fe(CO)5 to Fe(CO)4EtOH" Structural Dynamics 3 043204 (2016) doi: 10.1063/1.4941602

Ken R. Ferguson, Maximilian Bucher, Tais Gorkhover, Sébastien Boutet, Hironobu Fukuzawa, Jason E. Koglin, Yoshiaki Kumagai, Alberto Lutman, Agostino Marinelli, Marc Messerschmidt, Kiyonobu Nagaya, Jim Turner, Kiyoshi Ueda, Garth J. Williams, Philip H. Bucksbaum and Christoph Bostedt "Transient lattice contraction in the solid-to-plasma transition" Science Advances 2 (2016) doi: 10.1126/sciadv.1500837

R. G. Moore, W. S. Lee, P. S. Kirchman, Y. D. Chuang, A. F. Kemper, M. Trigo, L. Patthey, D. H. Lu, O. Krupin, M. Yi, D. A. Reis, D. Doering, P. Denes, W. F. Schlotter, J. J. Turner, G. Hays, P. Hering, T. Benson, J.-H. Chu, T. P. Devereaux, I. R. Fisher, Z. Hussain, and Z.-X. Shen "Ultrafast resonant soft x-ray diffraction dynamics of the charge density wave in TbTe3" Phys. Rev. B , 93 024304 (2016) doi: 10.1103/PhysRevB.93.024304

Tais Gorkhover, Sebastian Schorb, Ryan Coffee, Marcus Adolph, Lutz Foucar, Daniela Rupp, Andrew Aquila, John D. Bozek, Sascha W. Epp, Benjamin Erk, Lars Gumprecht, Lotte Holmegaard, Andreas Hartmann, Robert Hartmann, Günter Hauser, Peter Holl, Andre Hömke, Per Johnsson, Nils Kimmel, Kai-Uwe Kühnel, Marc Messerschmidt, Christian Reich, Arnaud Rouzée, Benedikt Rudek, Carlo Schmidt, Joachim Schulz, Heike Soltau, Stephan Stern, Georg Weidenspointner, Bill White, Jochen Küpper, Lothar Strüder, Ilme Schlichting, Joachim Ullrich,nDaniel Rolles, Artem Rudenko, Thomas Möller & Christoph Bostedt "Femtosecond and nanometre visualization of structural dynamics in superheated nanoparticles" Nature Photonics 10 93 (2016) doi: 10.1038/nphoton.2015.264

Kristoffer Haldrup, Wojciech Gawelda, Rafael Abela, Roberto Alonso-Mori, Uwe Bergmann, Amelie Bordage, Marco Cammarata, Sophie E. Canton, Asmus O Dohn, Tim B van Driel, David Mark Fritz, Andreas Galler, Pieter Glatzel, Tobias Harlang, Kasper S. Kjær, Henrik, T. Lemke, Klaus Braagaard Moller, Zoltán Németh, Mátyás Pápai, Norbert Sas, Jens Uhlig, Diling Zhu, György Vankó, Villy Sundstrom, Martin Meedom Nielsen, and Christian Bressler "Observing Solvation Dynamics with Simultaneous Femtosecond X-ray Emission Spectroscopy and X-ray Scattering" J. Phys. Chem. B --- (2016) doi: 10.1021/acs.jpcb.5b12471

J M Budarz, M P Minitti, D V Cofer-Shabica, B Stankus, A Kirrander, J B Hastings and P M Weber "Observation of femtosecond molecular dynamics via pump–probe gas phase x-ray scattering" J. Phys. B: At. Mol. Opt. Phys. 49 034001 (2016) doi: 10.1088/0953-4075/49/3/034001

Vodungbo, Boris; Tudu, Bharati; Perron, Jonathan; Delaunay, Renaud; Muller, Leonard; Berntsen, Magnus H.; Grubel, Gerhard; Malinowski, Gregory; Weier, Christian; Gautier, Julien; Lambert, Guillaume; Zeitoun, Philippe; Gutt, Christian; Jal, Emmanuelle; Reid, Alexander H.; Granitzka, Patrick W.; Jaouen, Nicolas; Dakovski, Georgi L.; Moeller, Stefan; Minitti, Michael P.; Mitra, Ankush; Carron, Sebastian; Pfau, Bastian; von Korff Schmising, Clemens; Schneider, Michael; Eisebitt, Stefan; Luning, Jan "Indirect excitation of ultrafast demagnetization" Scientific Reports 6 (2016) doi: 10.1038/srep18970

Elizabeth L. Baxter, Laura Aguila, Roberto Alonso-Mori, Christopher O. Barnes, Christopher A. Bonagura, Winnie Brehmer, Axel T. Brunger, Guillermo Calero, Tom T. Caradoc-Davies, Ruchira Chatterjee, William F. Degrado, James S. Fraser, Mohamed Ibrahim, Jan Kern, Brian K. Kobilka, Andrew C. Kruse, Karl M. Larsson, Heinrik T. Lemke, Artem Y. Lyubimov, Aashish Manglik, Scott E. McPhillips, Erik Norgren, Siew S. Pang, S. M. Soltis, Jinhu Song, Jessica Thomaston, Yingssu Tsai, William I. Weis, Rahel A. Woldeyes, Vittal Yachandra, Junko Yano, Athina Zounil and Aina E. Cohen "High-density grids for efficient data collection from multiple crystals" Acta Crystallographica Section D Structural Biology 72 2 (2016) doi: 10.1107/S2059798315020847

 

 FEL & Accelerator Science Performed at LCLS

 
M. Santana Leitner, L. Ge, Z. Li, C. Xu, C. Adolphsen, M. Ross and M. Carrasco "Studies of radiation fields of LCLS-II super conducting radio frequency cavities" International Journal of Modern Physics: Conference Series 44 1660209 (2016) doi: 10.1142/S201019451660209X

G. Hartmann, A. O. Lindahl, A. Knie, N. Hartmann, A. A. Lutman, J. P. MacArthur, I. Shevchuk, J. Buck, A. Galler, J. M. Glownia, W. Helml, Z. Huang, N. M. Kabachnik, A. K. Kazansky, J. Liu, A. Marinelli, T. Mazza, H.-D. Nuhn, P. Walter, J. Viefhaus, M. Meyer, S. Moeller, R. N. Coffee, and M. Ilchen "Circular dichroism measurements at an x-ray free-electron laser with polarization control" Review of Scientific Instruments 87 083113 (2016) doi: 10.1063/1.4961470

Jin Yang, Gang Huang, Qiang Du, Lawrence Doolittle, John Byrd "ADC evaluation boards design and test framework for LCLS-II precision receiver" Nucl Sci Tech 27 118 (2016) doi: 10.1007/s41365-016-0120-8

Senlin Huang, Yuantao Ding, Zhirong Huang, and Gabriel Marcus "Generation of subterawatt-attosecond pulses in a soft x-ray free-electron laser" Phys. Rev. Accel. Beams 19 080702(2016) doi: 10.1103/PhysRevAccelBeams.19.080702

A. Marinelli, R. Coffee, S. Vetter, P. Hering, G. N. West, S. Gilevich, A. A. Lutman, S. Li, T. Maxwell, J. Galayda, A. Fry, and Z. Huang "Optical Shaping of X-Ray Free-Electron Lasers" Phys. Rev. Lett. 116 254801 (2016) doi: 10.1103/PhysRevLett.116.254801

E. Hemsing, M. Dunning, B. Garcia, C. Hast, T. Raubenheimer, G. Stupakov & D. Xiang "Echo-enabled harmonics up to the 75th order from precisely tailored electron beams" Nature Photonics --- (2016) doi: 10.1038/nphoton.2016.101

Lutful Ahad, Ismo Vartiainen, Tero Setälä, Ari T. Friberg, Christian David, Mikako Makita, and Jari Turunen "On spectral and temporal coherence of x-ray free-electron laser beams" Optics Express 24 13081 (2016) doi: 10.1364/OE.24.013081

Alberto A. Lutman, James P. MacArthur, Markus Ilchen, Anton O. Lindahl, Jens Buck, Ryan N. Coffee, Georgi L. Dakovski, Lars Dammann, Yuantao Ding, Hermann A. Dürr, Leif Glaser, Jan Grünert, Gregor Hartmann, Nick Hartmann, Daniel Higley, Konstantin Hirsch, Yurii I. Levashov, Agostino Marinelli, Tim Maxwell, Ankush Mitra, Stefan Moeller, Timur Osipov, Franz Peters, Marc Planas, Ivan Shevchuk, William F. Schlotter, Frank Scholz, Jörn Seltmann, Jens Viefhaus, Peter Walter, Zachary R. Wolf, Zhirong Huang & Heinz-Dieter Nuhn "Polarization control in an X-ray free-electron laser" Nature Photonics (2016) doi: 10.1038/nphoton.2016.79

C. Limborg-Deprey, C. Adolphsen, D. McCormick, M. Dunning, K. Jobe, H. Li, T. Raubenheimer, A. Vrielink, T. Vecchione, F. Wang, and S. Weathersby "Performance of a first generation X-band photoelectron rf gun" Phys. Rev. Accel. Beams 19 053401 (2016) doi: 10.1103/PhysRevAccelBeams.19.053401

Zhen Zhang, Ryan Lindberg, William M. Fawley, Zhirong Huang, Jacek Krzywinski, Alberto Lutman, Gabriel Marcus, and Agostino Marinelli "Microbunching-instability-induced sidebands in a seeded free-electron laser" Phys. Rev. Accel. Beams 19 050701 (2016) doi: 10.1103/PhysRevAccelBeams.19.050701

Gennady Stupakov and Demin Zhou "Analytical theory of coherent synchrotron radiation wakefield of short bunches shielded by conducting parallel plates" Phys. Rev. Accel. Beams 19 044402 (2016) doi: 10.1103/PhysRevAccelBeams.19.044402

M. Dohlus and Ch. Henning "Periodic Poisson model for beam dynamics simulation" Phys. Rev. Accel. Beams 19 034401 (2016) doi: 10.1103/PhysRevAccelBeams.19.034401

Karl Bane, Gennady Stupakov "Dechirper wakefields for short bunches" Nuclear Instruments and Methods in Physics Research Section A: Accelerators, Spectrometers, Detectors and Associated Equipment 820 156 (2016) doi: 10.1016/j.nima.2016.02.055

Bruce E. Carlsten, Kip A. Bishofberger, Leanne D. Duffy, John W. Lewellen, Quinn R. Marksteiner, and Nikolai A. Yampolsky "Using Emittance Partitioning Instead of a Laser Heater to Suppress the Microbunch Instability" IEEE Transactions on Nuclear Science -- (2016) doi: --

Philip Heimann, Michael MacDonald, Bob Nagler, Hae Ja Lee, Eric Galtier, Brice Arnold and Zhou Xing "Compound refractive lenses as prefocusing optics for X-ray FEL radiation" J. Synchrotron Rad. 23 425 (2016) doi: 10.1107/S1600577516001636

C. Emma, K. Fang, J. Wu, and C. Pellegrini "High efficiency, multiterawatt x-ray free electron lasers" Phys. Rev. Accel. Beams 19 020705 (2016) doi: 10.1103/PhysRevAccelBeams.19.020705

S. Bettoni, P. Craievich, A. A. Lutman, and M. Pedrozzi "Temporal profile measurements of relativistic electron bunch based on wakefield generation" Phys. Rev. Accel. Beams 19 021304 (2015) doi: 10.1103/PhysRevAccelBeams.19.021304

Dan Gonnella, John Kaufman, and Matthias Liepe "Impact of nitrogen doping of niobium superconducting cavities on the sensitivity of surface resistance to trapped magnetic flux " J. Appl. Phys. 119 073904 (2016) doi: 10.1063/1.4941944

David Rich, Diling Zhu, James Turner, Dehong Zhang, Bruce Hill and Yiping Feng "The LCLS variable-energy hard X-ray single-shot spectrometer" J. Synchrotron Rad 23 3 (2016) doi: 10.1107/S1600577515022559

 

 Internal SLAC Publications

 
Z. Huang, A. Baker, C. Behrens, M. Boyes, J. Craft, F.-J. Decker, Y. Ding, P. Emma, J. Frisch, R. Iverson, J. Lipari, H. Loos, D. Walz "Measurement of Femtosecond LCLS Bunches Using the SLAC A-Line Spectrometer" SLAC Pub SLAC-PUB-16646 (2016)

K.L.F. Bane, S. Antipov, M. Fedurin, K. Kusche, C. Swinson, D. Xiang "Measurements of Terahertz Generation in a Metallic, Corrugated Beam Pipe" SLAC Pub SLAC-PUB-16536 (2016)

Karl Bane, Gennady Stupakov, Igor Zagorodnov "Analytical Formulas for Short Bunch Wakes in a Flat Dechirper" SLAC-Pub SLAC-PUB-16497 (2016)

P. Sperling, L. B. Fletcher, H.-K. Chung, E. J. Gamboa, H. J. Lee, Y. Omarbakiyeva, H. Reinholz, G. Ropke, S. Rosmej, U. Zastrau, and S. H. Glenzer "Resolving electrical conductivities from collisionally damped plasmons in isochorically heated warm dense aluminum" SLAC Pub SLAC-PUB-16501 (2016)

E. J. Gamboa, L. B. Fletcher, H. J. Lee, M.J. MacDonald, U. Zastrau, M. Gauthier, D. O. Gericke, J. Vorberger, E. Granados, J. B. Hastings, and S. H. Glenzer "Band gap opening in strongly compressed diamond observed by x-ray energy loss spectroscopy" SLAC Pub SLAC-PUB-16488 (2016)

T. Liang, J. Bauer, M. Cimeno, A. Ferrari, E. Galtier, E. Granados, P. Heimann, H. J. Lee, J. Liu, D. Milanthianaki, B. Nagler, A. Prinz, S Rokni, H. Tran and M. Woods "Measurements of Radiation Doses Induced by High Intensity Laser between 1016 and 1021 W/cm2 onto Solid Targets at LCLS MEC Instrument" SLAC Pub SLAC-PUB-16480 (2016)

F. Zhou, D. Bohler, Y. Ding, S. Gilevich, Z. Huang, H. Loos, D. Ratner "Recent understanding and improvements of the LCLS injector" SLAC PUB SLAC-PUB-16438 (2016)

 

 Publications Related to LCLS

 
Daniel Becker, Achim Streit "Realtime-Processing of Nanocrystallography Images" 18th International Conference on Computer Modelling and Simulation 425 (2016) doi: 10.1109/UKSim.2016.20

Souvik Chatterjee and Takashi Nakajima "Ramsey interferometry for resonant Auger decay through core-excited states" Phys. Rev. A 94 023417 (2016) doi: 10.1103/PhysRevA.94.023417

Margaret West, Andrew T. Ellis, Philip J. Potts, Christina Streli, Christine Vanhoof and Peter Wobrauschek "2016 Atomic Spectrometry Update – a review of advances in X-ray fluorescence spectrometry and its applications" J. Anal. At. Spectrom. --- (2016) doi: 10.1039/C6JA90034H

Lianmin Zheng, Yingchao Du, Zhe Zhang, Houjun Qian, Lixin Yan, Jiaru Shi, Zhen Zhang, Zheng Zhou, Xiaowei Wu, Xiaolu Su, Dong Wang, Qili Tian, Wenhui Huang, Huaibi Chen, Chuanxiang Tang "Development of S-band photocathode RF guns at Tsinghua University" Nuclear Inst. and Methods in Physics Research, A (2016) doi: 10.1016/j.nima.2016.07.015

Liubov Samoylova, Alexey Buzmakov, Oleg Chubarc and Harald Sinn "WavePropaGator: interactive framework for X-ray free-electron laser optics design and simulations" J. Appl. Cryst. 49 1347 (2016) doi: 10.1107/S160057671600995X

Max F. Hantke, Tomas Ekeberg and Filipe R. N. C. Maia "Condor: a simulation tool for flash X-ray imaging" J. Appl. Cryst. 49 (2016) doi: 10.1107/S1600576716009213

Kemp, Terence J. "Femtosecond studies: observing transition states and other ultra-short-lived species" Science Progress 99 133 (2016) doi: 10.3184/003685016X14616057013539

Amann-Winkel, Katrin, Bellissent-Funel, Marie-Claire; Bove, Livia E.; Loerting, Thomas; Nilsson, Anders; Paciaroni, Alessandro; Schlesinger, Daniel; Skinner, Lawrie "X-ray and Neutron Scattering of Water" Chem. Rev. 425 152021 (2016) doi: 10.1021/acs.chemrev.5b00663

Julien Flamant, Nicolas Le Bihan, Andrew V. Martin, Jonathan H. Manton "Expansion-maximization-compression algorithm with spherical harmonics for single particle imaging with x-ray lasers" Phys. Rev. E 93 053302 (2016) doi: 10.1103/PhysRevE.93.053302

Zehra Sayers, Bihter Avşar, Ersoy Cholak, Ines Karmous "Application of Advanced X-ray Methods in Life Sciences" Biochimica et Biophysica Acta (BBA) - General Subjects (2016) doi: 10.1016/j.bbagen.2016.05.008

C.D.M. Hutchison, J. Tenboer, C. Kupitz, K. Moffat, M. Schmidt, J.J. van Thor "Photocycle Populations with Femtosecond Excitation of Crystalline Photoactive Yellow Protein" Chemical Physics Letters -- (2016) doi: 10.1016/j.cplett.2016.04.087

Jose M. Martin-Garcia, Chelsie E. Conrad, Jesse Coe, Shatabdi Roy-Chowdhury, Petra Fromme "Review: Serial femtosecond crystallography: A revolution in structural biology" Archives of Biochemistry and Biophysics -- (2016) doi: 10.1016/j.abb.2016.03.036

R. Fung, A. Ourmazd, A. M. Hanna, O. Vendrell, S. Ramakrishna, T. Seideman, R. Santra & A. Ourmazd "Dynamics from noisy data with extreme timing uncertainty" Nature 532 471 (2016) doi: 10.1038/nature17627

Zoltan Jurek, Sang-Kil Son, Beata Ziaja and Robin Santra "XMDYN and XATOM: versatile simulation tools for qu­antitative modeling of X-ray free-electron laser induced dynamics of matter" J. Appl. Cryst. 49 (2016) doi: 10.1107/S1600576716006014

Thomas A. White, Valerio Mariani, Wolfgang Brehm, Oleksandr Yefanov, Anton Barty, Kenneth R. Beyerlein, Fedor Chervinskii, Lorenzo Galli, Cornelius Gati, Takanori Nakane, Alexandra Tolstikova, Keitaro Yamashita, Chun Hong Yoon, Kay Diederichs and Henry N. Chapman "Recent developments in CrystFEL" J. Appl. Cryst. 49 680 (2016) doi: 10.1107/S1600576716004751

Ryan A. Valenza and Gerald T. Seidler "Warm dense crystallography" Phys. Rev. B 93 115135 (2016) doi: 10.1103/PhysRevB.93.115135

C. Pellegrini, A. Marinelli, and S. Reiche "The physics of x-ray free-electron lasers" Rev. Mod. Phys. 88 015006 (2016) doi: 10.1103/RevModPhys.88.015006

U Weierstall, J Spence, BR Doak "Apparatus and Methods for Lipidic Cubic Phase (LCP) Injection for Membrane Protein Investigations" US Patent 2016/0051995 A1 (2016)

Silvia Russi, Jinhu Song, Scott E. McPhillips and Aina E. Cohen "The Stanford Automated Mounter: pushing the limits of sample exchange at the SSRL macromolecular crystallography beamlines" J. Appl. Cryst. 49 622 (2016) doi: 10.1107/S1600576716000649

Wilfried Wurth "Characterization of the Time Structure of Free-Electron Laser Radiation" Synchrotron Light Sources and Free-Electron Lasers Springer International Publishing Switzerland 1 (2015) doi: 10.1007/978-3-319-04507-8_49-2

 

 Publications of LCLS Scientists (not performed at LCLS)

 
K. A. Larsen, J. P. Cryan, N. Shivaram, E. G. Champenois, T. W. Wright, D. Ray, O. Kostko, M. Ahmed, A. Belkacem, and D. S. Slaughter "VUV and XUV reflectance of optically coated mirrors for selection of high harmonics" Optics Express 24 18209 (2016) doi: 10.1364/OE.24.018209

M. Z. Mo, X. Shen, Z. Chen, R. K. Li, M. Dunning, K. Sokolowski-Tinten, Q. Zheng, S. P. Weathersby, A. H. Reid, R. Coffee, I. Makasyuk, S. Edstrom, D. McCormick, K. Jobe, C. Hast, S. H. Glenzer, and X. Wang "Single-shot mega-electronvolt ultrafast electron diffraction for structure dynamic studies of warm dense matter" Rev. Sci. Instrum. 87 11D810 (2016) doi: 10.1063/1.4960070

Richard J Bean, Andrew Aquila, Liubov Samoylova and Adrian P Mancuso "Design of the mirror optical systems for coherent diffractive imaging at the SPB/SFX instrument of the European XFEL" J. Opt. 18 074011 (2016) doi: 10.1088/2040-8978/18/7/074011

Jie Yang, Markus Guehr, Theodore Vecchione, Matthew Robinson, Renkai Li, Nick Hartmann, Xiaozhe Shen, Ryan N Coffee, Jeff Corbett, Alan Fry, Kelly Gaffney, Tais Gorkhover, Carsten Hast, Keith Jobe, Igor Makasyuk, Alexander Reid, Joseph Robinson, Sharon Vetter, Fenglin Wang, Stephen Weathersby, Charles Yoneda, Xijie Wang and Martin Centurion "Femtosecond Gas Phase Electron Diffraction with MeV Electrons" Faraday Discuss --- (2016) doi: 10.1039/C6FD00071A

S. Le Pape, L. F. Berzak Hopkins, L. Divol, N. Meezan, D. Turnbull, A. J. Mackinnon, D. Ho, J. S. Ross, S. Khan, A. Pak, E. Dewald, L. R. Benedetti, S. Nagel, J. Biener, D. A. Callahan, C. Yeamans, P. Michel, M. Schneider, B. Kozioziemski, T. Ma, A. G. Macphee, S. Haan, N. Izumi, R. Hatarik, P. Sterne, P. Celliers, J. Ralph, R. Rygg, D. Strozzi, J. Kilkenny, M. Rosenberg, H. Rinderknecht, H. Sio, M. Gatu-Johnson, J. Frenje, R. Petrasso, A. Zylstra, R. Town, O. Hurricane, A. Nikroo, and M. J. Edwards "The near vacuum hohlraum campaign at the NIF: A new approach" Phys. Plasmas 23 056311 (2016) doi: 10.1063/1.4950843

Turnbull, D. and Berzak Hopkins, L. F. and Le Pape, S. and Divol, L. and Meezan, N. and Landen, O. L. and Ho, D. D. and Mackinnon, A. and Zylstra, A. B. and Rinderknecht, H. G. and Sio, H. and Petrasso, R. D. and Ross, J. S. and Khan, S. and Pak, A. and Dewald, E. L. and Callahan, D. A. and Hurricane, O. and Hsing, W. W. and Edwards, M. J. "Symmetry control in subscale near-vacuum hohlraums" Phys. Plasmas 23 052710 (2016) doi: 10.1063/1.4950825

Chatterjee, Ruchira; Han, Guangye; Kern, Jan; Gul, Sheraz; Fuller, Franklin D.; Garachtchenko, Anna; Young, Iris D.; Weng, Tsu-Chien; Nordlund, Dennis; Alonso-Mori, Roberto; Bergmann, Uwe; Sokaras, Dimosthenis; Hatakeyama, Makoto; Yachandra, Vittal K.; Yano, Junko "Structural changes correlated with magnetic spin state isomorphism in the S2 state of the Mn4CaO5 cluster in the oxygen-evolving complex of photosystem II " Chem. Sci. -- (2016) doi: 10.1039/C6SC00512H

Khan, S. F. and MacLaren, S. A. and Salmonson, J. D. and Ma, T. and Kyrala, G. A. and Pino, J. E. and Rygg, J. R. and Field, J. E. and Tommasini, R. and Ralph, J. E. and Turnbull, D. P. and Mackinnon, A. J. and Baker, K. L. and Benedetti, L. R. and Bradley, D. K. and Celliers, P. M. and Dewald, E. L. and Dittrich, T. R. and Berzak Hopkins, L. and Izumi, N. and Kervin, M. L. and Kline, J. L. and Nagel, S. R. and Pak, A. and Tipton, R. E. "Symmetry tuning of a near one-dimensional 2-shock platform for code validation at the National Ignition Facility" Phys. Plasmas 23 042708 (2016) doi: 10.1063/1.4947223

Chun Hong Yoon, Mikhail V. Yurkov, Evgeny A. Schneidmiller, Liubov Samoylova, Alexey Buzmakov, Zoltan Jurek, Beata Ziaja, Robin Santra, N. Duane Loh, Thomas Tschentscher & Adrian P. Mancuso "A comprehensive simulation framework for imaging single particles and biomolecules at the European X-ray Free-Electron Laser" Scientific Reports 6 (2016) doi: 10.1038/srep24791

J. P. Hinton, E. Thewalt, Z. Alpichshev, F. Mahmood, J. D. Koralek, M. K. Chan, M. J. Veit, C. J. Dorow, N. Barišić, A. F. Kemper, D. A. Bonn, W. N. Hardy, Ruixing Liang, N. Gedik, M. Greven, A. Lanzara & J. Orenstein "The rate of quasiparticlerecombination probes theonset of coherence in cuprate superconductors" Scientific Reports 6 23610 (2016) doi: 10.1038/srep23610

Jie Yang, Markus Guehr, Theodore Vecchione, Matthew S. Robinson, Renkai Li, Nick Hartmann, Xiaozhe Shen, Ryan Coffee, Jeff Corbett, Alan Fry, Kelly Gaffney, Tais Gorkhover, Carsten Hast, Keith Jobe, Igor Makasyuk, Alexander Reid, Joseph Robinson, Sharon Vetter, Fenglin Wang, Stephen Weathersby, Charles Yoneda, Martin Centurion & Xijie Wang "Diffractive imaging of a rotational wavepacket in nitrogen molecules with femtosecond megaelectronvolt electron pulses" Nature Communications 7 11232 (2016) doi: 10.1038/ncomms11232

Green, B.; Kovalev, S.; Asgekar, V.; Geloni, G.; Lehnert, U.; Golz, T.; Kuntzsch, M.; Bauer, C.; Hauser, J.; Voigtlaender, J.; Wustmann, B.; Koesterke, I.; Schwarz, M.; Freitag, M.; Arnold, A.; Teichert, J.; Justus, M.; Seidel, W.; Ilgner, C.; Awari, N.; Nicoletti, D.; Kaiser, S.; Laplace, Y.; Rajasekaran, S.; Zhang, L.; Winnerl, S.; Schneider, H.; Schay, G.; Lorincz, I.; Rauscher, A. A.; Radu, I.; MÃhrlein, S.; Kim, T. H.; Lee, J. S.; Kampfrath, T.; Wall, S.; Heberle, J.; Malnasi-Csizmadia, A.; Steiger, A.; Muller, A. S.; Helm, M.; Schramm, U.; Cowan, T.; Michel, P.; Cavalleri, A.; Fisher, A. S.; Stojanovic, N.; Gensch, M. "High-Field High-Repetition-Rate Sources for the Coherent THz Control of Matter" Scientific Reports 6 (2016) doi: 1038/srep22256

 

 Books & Conferences

 
Daniel Becker, Achim Streit "Realtime-Processing of Nanocrystallography Images" 18th International Conference on Computer Modelling and Simulation 425 (2016) doi: 10.1109/UKSim.2016.20

Lan Zhu, Uwe Weierstall, Vadim Cherezov, and Wei Liu "Serial Femtosecond Crystallography of Membrane Proteins" Advances in Experimental Medicine and Biology 922 Chapter: The Next Generation in Membrane Protein Structure Determination (2016) doi: 10.1007/978-3-319-35072-1

Kunio Hirata, James Foadi, Gwyndaf Evans, Kazuya Hasegawa, Oliver B. Zeldin "Structural Biology with Microfocus Beamlines" Springer Protocols Handbooks: Advanced Methods in Structural Biology 241 (2016) doi: 10.1007/978-4-431-56030-2_14

M McIntire, D Ratner, S Ermon "Sparse Gaussian Processes for Bayesian Optimization" Conference on Uncertainty in Artificial Intelligence (UAI) Proceedings 269 (2016)

Matthias C. Hoffmann, Michael E. Kozina, James M. Glownia, Diling Zhu, Tim B. van Driel, Stefano Bonetti, and Urs Staub "Direct observation of lattice motion driven by strong THz pulses" CLEO: Science and Innovations 2016 San Jose, 5–10 June 2016 (2016) ISBN: 978-1-943580-11-8

Cindy Bolme, Siegfried Glenzer & Alan Fry "Third User Workshop on High-Power Lasers at the Linac Coherent Light Source" Third User Workshop on High-Power Lasers at the Linac Coherent Light Source, Synchrotron Radiation News 29 14 (2016) doi: 10.1080/08940886.2016.1149428

Richard A. Kirian and Henry N. Chapman "Imaging of Objects by Coherent Diffraction of X-Ray Free-Electron Laser Pulses" Synchrotron Light Sources and Free-Electron Lasers PUBDB-2016-00802 1 (2016) doi: 10.1007/978-3-319-04507-8_27-2

Sébastien Bouteta, Aina E. Cohen & Soichi Wakatsuki "The New Macromolecular Femtosecond Crystallography (MFX) Instrument at LCLS" Synchrotron Radiation News 29 23 (2016) doi: 10.1080/08940886.2016.1124681

E. Carrone "Controls and Machine Protection Systems" Proceedings of the Joint International Accelerator School, Newport Beach, US, 5–14 November 2014, CERN-2016-002 271 (2016) doi: 10.5170/CERN-2016-002.271

Wilfried Wurth "Characterization of the Time Structure of Free-Electron Laser Radiation" Synchrotron Light Sources and Free-Electron Lasers Springer International Publishing Switzerland 1 (2015) doi: 10.1007/978-3-319-04507-8_49-2

Pieter Glatzel, Roberto Alonso-Mori and Dimosthenis Sokaras "Hard X-Ray Photon-in/Photon-out Spectroscopy: Instrumentation, Theory and Applications" John Wiley & Sons, Ltd, Chichester, UK. eds Jeroen A. Van Bokhoven and Carlo Lamberti (2016) doi: 10.1002/9781118844243.ch6

S. H. Glenzer, L. B. Fletcher, E. Gamboa, M. Gauthier, J. Kim, M. MacDonald, C. Rödel, W. Schumaker "High-Power Laser Pump-Probe Experiments At The Linac Coherent Light Source " High-Brightness Sources and Light-Driven Interactions EM6A.3 (2016)

Gianluca Geloni "Self-Seeded Free-Electron Lasers" Synchrotron Light Sources and Free-Electron Lasers 425 1 (2015) doi: 10.1007/978-3-319-04507-8_4-1

SLAC SLAC National Accelerator Laboratory, Menlo Park, CA
Operated by Stanford University for the U.S. Dept. of Energy